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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932842.1_cds_XP_016479274.1_70829
CDS Infomation

[gene=LOC107800596] [db_xref=GeneID:107800596] [protein=low affinity sulfate transporter 3-like] [protein_id=XP_016479274.1] [location=join(1101..1574,1666..1714,1817..2024,2113..2284,2392..2460,3154..3384,3506..3632,7253..7539,12747..12940,13026..13114,13406..13482,13614..13757)] [gbkey=CDS]
Sequence

ATGGCTGTATCAAGAGAAGGTGAAACAGAGTCCTCACACGTTGCCCCTGAGGCATCAAAC
AACAAAGTTCTCCCCCAAACAGTTGAAGAAACAACTCTTCCAACTTTGGTTGAGAGTCAG
AATAATACTTGTCATCAGTTCTCCCAAACACTTCAAGTAGAGAAACAACTTTCTTTGTTC
TCCCAAACACTTCAAACACCTATGGCTTCTGAGAATGAGCGAACGCGTAATTGGGTACTA
AATGTGCCGGAACCACCAGGCCTGTTTTCCAACCTGAAGAGTTCATTCAAGAAAACAATA
TTCTCTCCTCTTGAAAACAAGCTTCACTGCCTCGGAAAGCAGCCCGTTCCTGCACTCGTT
TCGATTCTCAAAACCATATTTCCTCCACTTACTTGGTGTAAAGAATACAATGTGACAAAA
TTCAAAAGTGATATCTTGGCTGGTTTAACTCTTGCAAGCCTTTGCATCCCTCAGAGCATT
GGCTACGCGACTCTTGCTAAACTTGATCCTCAGTATGGCCTGTACACAAGTGTTATCCCA
CCGCTAATTTACTCTATGATGGGGAGTTCAAGAGATATAGCAATTGGACCAGTTGCTGTT
GTTTCACTACTCTTGTCCTCAATGATTCAGAAATTTGAAGATCCTACTGCTAATCCAGCT
GCATATACAAAACTCGTGCTTACTGTAACCTTCTTCGCGGGTACTTTTCAAGCTGCCTTT
GGATTACTTAGGTTGGGATTTCTGGTTGATTTTCTATCACATGCTGCTATTGTTGGTTTC
ATGGCTGGTGCTGCCTGTGTGATTGGTCTACAACAGCTCAAATCATTGCTTGGGCTTTCA
AAGTTTACAAACAATACTGATATCATCTCTGTCTTAAGTTCTATCTACAAATCAATGCAT
ACATGGAATCCTTTTAGCTTTATGATTGGGAGTTCATTCTTGATCTTCATCCTTTTTACC
AAGTACTATCTGGCAAGAAAGCACAAGAAACTCTTCTTGTTATCTGCAATGGCGCCATTG
CTGTCTGTAATTCTGTCAACATTAATTGTTTTCTTGACAAGAGCTGATAAACATGGTGTT
AAGATAGTGAAGCACATCACTGGAGGTTTGAATCCGACTTCCATCCATGACTTGCAGTTC
AATAGTCCTCATACTGCTGAAGCTGCCAAAATTGGGCTCATAGTTGCACTTATCGCTCTC
ACAGAAGCCATTGCTGTAGGCCGATCGTTTGCTACAATGAAAGGATACCGACTTGATGGA
AACAAGGAAATGCTGGCTATGGGTGTTATGAACATTACTGGATCTTTAACTTCTTGTTAT
GTTGCAACTGGTTCATTCTCAAGAACTGCAGTCAACTTCAGTGCTGGTTGTGAAACTACA
GTGTCCAACATAGTGATGGCTGTAACAGTGCTAATATCACTAGAATTTTTCACAAGGCTA
TTGTACTTCACTCCAATAGCCATTCTTGCTTCCATTATACTTTCTGCTTTACCTGGACTT
ATCAACCTAAGTGAAGCTAAATACATTTGGAAAGTTGATAAAATGGACTTCCTTACTTGC
ATTGCTGCATTTCTTGGTGTCCTTTTTGTATCTGTGGAGATTGGCCTGCTACTCGCGGTT
GGTATATCATTTGCAAAGGTCATTCTAAACTCAATTCAACCCGGGACAGAAAAACTAGGA
AGGCTTCCGGGAAGTGATTTGTTTGGAGATGTGAACCAATATCCCATGGCAATGAAGATA
CCTGGGGCTCTCATTGTCAGAGTCAAGTCTGCTTTGCTTTGTTTTGCAAATGCCAACTTC
ATTAGAGCAAAGATTTTGGACTTGGCACTGGAAGAACAAAATGAGGATGCCATAGAAAGT
GCCGAAGATAGAGTGCAACTAGTTATTCTTGACATGTCAAATTTGCTCAACATTGACACA
ACCAGTATAGCTTCTCTAGAGGAACTGCACAGTGAGCTGGAATCAAATGGAATGAAGTTG
GCACTAGCGAACCCAAGGTGGCATGTGATCCACAAATTGAGGTTAACCAAATTTGTGAAG
AAAATTGAAGGGAGGGTCTTTTTGACCATTGGAGAAGCCATTGAAGCATGTTTTACTAGC
AAGAACATGCTTCATCTTTGA

Peptide Sequence

PEP ID

XP_016479274.1
PEP Infomation

PREDICTED: low affinity sulfate transporter 3-like [Nicotiana tabacum]
Sequence

MAVSREGETESSHVAPEASNNKVLPQTVEETTLPTLVESQNNTCHQFSQTLQVEKQLSLF
SQTLQTPMASENERTRNWVLNVPEPPGLFSNLKSSFKKTIFSPLENKLHCLGKQPVPALV
SILKTIFPPLTWCKEYNVTKFKSDILAGLTLASLCIPQSIGYATLAKLDPQYGLYTSVIP
PLIYSMMGSSRDIAIGPVAVVSLLLSSMIQKFEDPTANPAAYTKLVLTVTFFAGTFQAAF
GLLRLGFLVDFLSHAAIVGFMAGAACVIGLQQLKSLLGLSKFTNNTDIISVLSSIYKSMH
TWNPFSFMIGSSFLIFILFTKYYLARKHKKLFLLSAMAPLLSVILSTLIVFLTRADKHGV
KIVKHITGGLNPTSIHDLQFNSPHTAEAAKIGLIVALIALTEAIAVGRSFATMKGYRLDG
NKEMLAMGVMNITGSLTSCYVATGSFSRTAVNFSAGCETTVSNIVMAVTVLISLEFFTRL
LYFTPIAILASIILSALPGLINLSEAKYIWKVDKMDFLTCIAAFLGVLFVSVEIGLLLAV
GISFAKVILNSIQPGTEKLGRLPGSDLFGDVNQYPMAMKIPGALIVRVKSALLCFANANF
IRAKILDLALEEQNEDAIESAEDRVQLVILDMSNLLNIDTTSIASLEELHSELESNGMKL
ALANPRWHVIHKLRLTKFVKKIEGRVFLTIGEAIEACFTSKNMLHL

Transcript Sequence

Gene sequence data has not been registered.